Node Express not loading Javascript after redirect

I have a Node.js Express application that checks for authentication before allowing you onto the homepage. For reasons I cannot figure out it loads my css, but not my javascript after the redirect. Here is the relevant code in my app.js file:

app.get('/',journal.logInCheck,journal.index);
app.get('/logon',journal.logon);
app.post('/authenticate',journal.authenticate);

and here is my journal.js file with dummy auth code:

/***************************************
    Logon Form and Authentication Routes
****************************************/

/** Check for Authentication **/

exports.logInCheck = function(req,res,next){
    console.log('login check');
    if(req.session.auth == true){
        console.log('login check = true');
        next();
    }else{
        console.log('login check = false');
        res.redirect('/logon');
    }
}

/** Logon Form **/

exports.logon = function(req,res){
    res.render('logon',{layout:'logonlayout',title:'Logon'});    
}

/** Authenticates data after it's been submitted by form above **/

exports.authenticate = function(req,res,next){
    console.log('authenticating');
    if(req.body.username=="at" && req.body.password=="wm"){
        req.session.auth = true;
        console.log('logon success');
        res.redirect('/');
    }else{
        req.session.auth = false;
        console.log('logon fail');
        res.redirect('/logon');
    }

}

What's happening is once I authenticate correctly, the program redirects and my node console only shows the two css files being requested, but not the five or six javascript files.

Also I noticed that the url isn't completely rewritten. It shows htt://domain.com:3000/logon#home when it should be showing http://domain.com:3000/#home

As requested here is the layout.jade. This being the only file that loads any javascript and is common to all pages. FYI, the page does load perfectly fine if I remove the logon#home from the url.

!!!
html
  head
    title= title
    link(rel='stylesheet', href='/jqtouch-1.0-b4-rc/themes/css/jqtouch.css', type='text/css', media='screen')
    link(rel='stylesheet', href='/stylesheets/style.css', type='text/css', media='screen')
    script(src="/jqtouch-1.0-b4-rc/src/lib/zepto.js", charset="utf-8")
    script(src="/jqtouch-1.0-b4-rc/src/jqtouch.js", charset="utf-8")
    script(src="/javascripts/ajax.js")
    script(src="/javascripts/moderniz.js")
    script(src="/javascripts/sjcl.js")
    script
      var jQT = new $.jQTouch({
       icon: 'jqtouch.png',
       addGlossToIcon: true,
       startupScreen: 'jqt_startup.png',
       statusBar: 'black'
      });
  body
    block content

Here's the journal.index

exports.index = function(req, res){
res.render('journal', { title: 'Journal App' });
};

Update: I setup a testing app just to isolate the issue. Express redirects do not work properly when the following JQTouch code is present in my jade template.

script
  var jQT = new $.jQTouch({
  icon: 'jqtouch.png',
  addGlossToIcon: true,
  startupScreen: 'jqt_startup.png',
  statusBar: 'black'
 });